By the way, anyone reading this and seeing some of Stathis's older posts may wonder if the specialist was me..
It wasn't us.
Sorry to hear about your troubles Stathis and glad to hear your car is running again.
If anything like this happens again, please call me for some free advice.
To be honest, we condemn the H&P immobilisers from time to time, normally because the main control unit has failed completely, in which cases we typically charge £75 to remove the system to restore the wiring where the immobiliser was installed back to factory condition, using soldered joints where required, and then advising the installation of a Toad Powerkey as a replacement system, as a true Thatchum Category 2 system, which often works out a more cost effective solution than repairing the H&P system.
However, by the sounds of your post here and a direct PM on the forum, the specialist or bodyshop in question should have tested the system rather than saying it needed to be axed for the sake of what turned out to be a bad contact or connector.
One word of advice to owners of cars with the H&P immobiliser. This system does predate the Thatchum standards, although has been given a historic thatchum cat2 status, however in the event of a insurance total loss due to theft, due to the variable standards of original installation, an insurance company may not find the system was installed to Thatchum standards originally and therefore invalidate your insurance. This is not an issue at H&P's fault, but due to something out of their control, which was main dealer and PCarsGB technicians not installing to cat2 standards, because in fairness the standards did not exist back then.